gromacs benchmark and quad Xeons
Velocet
math at velocet.ca
Tue Jun 18 15:06:44 PDT 2002
On Tue, Jun 18, 2002 at 04:28:04PM -0500, Richard Walsh's all...
> On Tue, Jun 18, 2002 at 02:14:02PM -0400, Velocet wrote:
> ...
> > Are the original rpms for gromacs which are generally compiled for P2/MMX
> > going to be absolutely the worst possible situation for a Xeon? Or should
> > they work relatively near best-speed (minus missing SSE and SSE2 instructions,
> > though I dont even know if GCC gives the full set of either for a hand
> > compile).
> >
> > What's wrong here? Any ideas?
>
> My first reaction is to wonder what your memory foot print is ...
> the bandwidth of all quad's I have seen (except the ES-45 with
> Compaq's typhoon chipset and cross-bar) has been lousy. If you
> are not running mostly/completely in cache this could be an
> issue. Competition from all four CPUs for bandwidth could kill
> performance.
but with DDR ram on a dual Tyan 2460/66 board I saw like 2.4x or some odd
speedup with 2 cpus over 1. (superlinear speedup) - as I mentioned,
possibly due to reduced cache thrashing.
> Have your tried running on one CPU? Can you shrink the test
> case to make sure it is cache and then look at the performance?
> How does stream performanc on this quad?
Whats a good test?
I'll try out one CPU and see what happens. Too bad the thing is
slated for production later this week - wont be able to put nasty
calculation stuff on it anymore... :(
Not many quad xeons lying around just waiting for a thrashing :)
Anyone got one handy? :)
I'd love to see some 8-way stuff too. Takers?
/kc
>
>
> rbw
> #---------------------------------------------------
> # Richard Walsh
> # Project Manager, Cluster Computing, Computational
> # Chemistry and Finance
> # netASPx, Inc.
> # 1200 Washington Ave. So.
> # Minneapolis, MN 55415
> # VOX: 612-337-3467
> # FAX: 612-337-3400
> # EMAIL: rbw at networkcs.com, richard.walsh at netaspx.com
> # rbw at ahpcrc.org
> #
> #---------------------------------------------------
> # "What you can do, or dream you can, begin it;
> # Boldness has genius, power, and magic in it."
> # -Goethe
> #---------------------------------------------------
> # "Without mystery, there can be no authority."
> # -Charles DeGaulle
> #---------------------------------------------------
> # "Why waste time learning when ignornace is
> # instantaneous?" -Thomas Hobbes
> #---------------------------------------------------
> # "In the chaos of a river thrashing, all that water
> # still has to stand in line." -Dave Dobbyn
> #---------------------------------------------------
>
--
Ken Chase, math at velocet.ca * Velocet Communications Inc. * Toronto, CANADA
More information about the Beowulf
mailing list