[Beowulf] Three questions on a new Beowulf Cluster
John P. Kosky, PhD
jpkosky at sps.aero
Fri Feb 22 07:50:18 PST 2008
My company is taking it's first foray into the world of HPC with an
expandable architecture, 16 processor (comprised of quad core Opterons),
one header node cluster using Infiniband interconnects. OS has
tentatively been selected as SUSE 64-bit Linux. The principal purpose of
the cluster is as a tool for spacecraft and propulsion design support.
The cluster will therefore be running the most recent versions of
commercially available software - initially for FEA and CFD using COMSOL
Multiphysics and associated packages, NASTRAN, MatLab modules, as well
as an internally modified and expanded commercial code for materials
properties prediction,with emphasis on polymer modeling (Accelrys
Materials Studio). Since we will be repetitively running standard
modeling codes on this system, we are trying to make the system as user
friendly as possible... most of our scientists and engineers want to use
this as a tool, and not have to become cluster experts. The company WILL
be hiring an IT Sys Admin with good cluster experience to support the
system, however...
Question 1:
1) Does anyone here know of any issues that have arisen running the
above named commercial packages on clusters using infiniband?
Question 2:
2) As far as the MPI for the system is concerned, for the system and
application requirements described above, would OpenMPI or MvApich be
better for managing node usage?
ANY help or advice would be greatly appreciated.
Thanks in advance
John
John P. Kosky, PhD
Director of Technical Development
Space Propulsion Systems
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