Clearing memory?
Qiang Cui
qiang at tammy.harvard.edu
Mon Mar 25 17:02:25 PST 2002
Dear all,
We are using an Athlon based beowulf cluster to perform CHARMM
type of calculations (OS: Redhat 7.1). One issue that we noticed is that
the memory available to use seems to be decreasing all the time: our
machines come with 1GB of memory, but "top" tells us that the available
memory is only on the order of several hundred MBs even without any
serious calculations - it looks like that some blocks of memory were not
fully released after previous calculations. This problem forces us to
reboot the machine from time to time for large-memory calculations.
Any suggestions on how to cope with this problem? Thanks!
___________________________________________________________________________
Qiang Cui
Dept. of Chem. _ __..-;''`--/'/ /.',-`-.
Harvard Univ. (`/' ` | \ \ \\ / / / / .-'/`,_
12 Oxford St., /'`\ \ | \ | \| // // / -.,/_,'-,
Cambridge, MA 02138 /<7' ; \ \ | ; ||/ /| | \/ |`-/,/-.,_,/')
(617)-495-8997 / _.-, `,-\,__| _-| / \ \/|_/ | '-/.;.\'
(617)-495-1775 `-` f/ ; / __/ \__ `/ |__/ |
Fax: (617)-496-3204 `-' | -| =|\_ \ |-' |
(617)-496-4793 __/ /_..-' ` ),' //
((__.-'((___..-'' \__.'
http://yuri.harvard.edu/~qiang/wisc/research.html
http://yuri.harvard.edu/~qiang
32 Whites Ave. #4408
Watertown, MA 02472
(617)-926-6027
__________________________________________________________________________
More information about the Beowulf
mailing list