[Beowulf] [owner-chemistry@ccl.net: CCL:G: parallel G03 in Linux cluster]
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Reuti reuti at staff.uni-marburg.deSat Mar 18 11:37:54 PST 2006
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Quoting Mark Hahn <hahn at physics.mcmaster.ca>: >> >> The OpenMP parallelization should also work without Linda - but of course >> >> limited to some routines and 2 cores. > > I wonder if this is only true if you, for instance, compile gaussian > with a PGI demo license or something. also, the normal (old) way of > using SMP is fork-based parallelism with SYSV shm. is this separate > (orthogonal) to OpenMP-based parallelism? I suspect the latter is only > used for SMP parallelism within parallelized blas libraries like MKL. I compiled G03.C02 without OpenMP and tried to use it still with %nprocs but it was not working, as it was before in G03.B05. So I contacted Gaussian and they stated, that the old fork-model is gone since C.02 (or maybe even since C.01). The SMP is now only OpenMP according to this info I have. > >> machines with single dual-core CPUs. Let's rephrase: ...but limited to the >> cores in each of the machines. > > mosix, I believe, provides network-shared SYSV shm. I wonder if anyone has You mean like e.g. http://www.kerrighed.org , indeed, would be interesting. -- Reuti > tried to use gaussian that way. depending on the sharing patters, it might > work pretty well - my understanding is that the shm is used mainly for > caching intermediate values (integrals?), which might be > write-once-read-mostly, and therefore friendly to the kind of caching > necessary for any page-based net-shm implementation. > > regards, mark hahn. >
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