nfsd question on linux (rh 7.3)
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David Mathog mathog at mendel.bio.caltech.eduFri Jan 10 12:39:03 PST 2003
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A simple job runs simultaneously on 20 compute nodes. Each job reads the same files via nfs. In /etc/rc.d/init.d/nfs RPCNFSDCOUNT=25 and ps -ef shows 25 nfsd. (25 because there is 1 nfsd per possible client node, but some of them aren't in the compute cluster.) Yet when the jobs are running "top" typically shows only 3 or 4 of the nfsd processes getting any CPU time. And then not all that much - only 4-5% CPU max. Why aren't more nfsd processes being brought in? Anything else I can do to bump up throughput with NFS? Nothing else is running. It's as if a small set of nfsd servers are handling all the requests even though 25 are available. Essentially these jobs just read the files from disk into memory, and then close the files before processing anything. It appears that NFS is rate limiting. There's about 330Mb of data to be read across the 100baseT network to each node. All jobs complete at roughly the same time. Thanks, David Mathog mathog at caltech.edu Manager, Sequence Analysis Facility, Biology Division, Caltech
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